Overview

Created: 2019-02-05. Parsed: 2019-03-08

Aim of the project

Study:

Methodology

For the experiment we have used collection of Salmonella (\(n \approx 50\)) and Escherichia (\(n \approx 250\)) strains.

Salmonella growth conditions:

Escherichia coli growth conditions:

Salmonella | Results as boxplot

Salmonella | Average fluorescence intensity

Average intensity of all repeats.

Salmonella | Biofilm forming strength

Salmonella | Biofilm forming strength - consensus strains

All repeats in specific conditions match.

Salmonella | Biofilm forming strength - consensus strains | Table

E. coli | All results as boxplot

E. coli | All results showed as boxplot, split 1/2

E. coli | All results showed as boxplot, split 2/2

E. coli | Average fluorescence intensity

Average intensity of all repeats.

E. coli | Average fluorescence intensity, split 1/2

E. coli | Average fluorescence intensity, split 2/2

E. coli | Biofilm forming strength

Strains 4516, 5084, 5093, 5096, 5541 do not have second repeat due to file corruption (software saved intensiy values as dates).

E. coli | Biofilm forming strength, split 1/2

E. coli | Biofilm forming strength, split 2/2

E. coli | Biofilm forming strength - consensus strains

All repeats in specific conditions match.

E. coli | Biofilm forming strength - consensus strains | Table

Absence biofilm formers

There are some Salmonella strains that in every condition do not produce any biofilm.

Weak biofilm formers

There are no strains that in every condition produce very weak biofilm.

Medium biofilm formers

There are no strains that in every condition produce very weak biofilm.

Strong biofilm formers

There are E. coli strains that in every condition produce very strong biofilm.

Conclusion

Salmonella | Average fluorescence intensity | mean = replicates + repeats

Average intensity of all repeats.

Salmonella | Average fluorescence intensity | mean = replicates + repeats + median

Average intensity of all repeats.

Salmonella | Biofilm forming strength | mean = replicates + repeats

Salmonella | Biofilm forming strength | mean = replicates + repeats + medium

E. coli | Average fluorescence intensity | mean = replicates + repeats

Average intensity of all repeats.

E. coli | Average fluorescence intensity, split 1/2 | mean = replicates + repeats

E. coli | Average fluorescence intensity, split 2/2 | mean = replicates + repeats

E. coli | Average fluorescence intensity | mean = replicates + repeats + medium

Average intensity of all repeats.

E. coli | Average fluorescence intensity, split 1/2 | mean = replicates + repeats + medium

E. coli | Average fluorescence intensity, split 2/2 | mean = replicates + repeats + medium

E. coli | Biofilm forming strength | mean = replicates + repeats

Strains 4516, 5084, 5093, 5096, 5541 do not have second repeat due to file corruption (software saved intensiy values as dates).

E. coli | Biofilm forming strength, split 1/2 | mean = replicates + repeats

E. coli | Biofilm forming strength, split 2/2 | mean = replicates + repeats

E. coli | Biofilm forming strength | mean = replicates + repeats + medium

Strains 4516, 5084, 5093, 5096, 5541 do not have second repeat due to file corruption (software saved intensiy values as dates).

E. coli | Biofilm forming strength, split 1/2 | mean = replicates + repeats + medium

E. coli | Biofilm forming strength, split 2/2 | mean = replicates + repeats + medium